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Anti-Neurexin-3-alpha [IPI-mNRXN3a.67] in immunohistochemistry (IHC) (Mouse)

Addgene #237694

Data Submitted By
Theresa Wong and Seth Grant
Lab Name
Seth Grant, University of Edinburgh
Submission Date
May 29, 2026
Publication Date
June 10, 2026 (modified June 18, 2026)
DOI
https://doi.org/10.57733/addgene.jvibne
Abstract
Experimental results for Anti-Neurexin-3-alpha [IPI-mNRXN3a.67] (Addgene #237694) in an immunohistochemistry (IHC) application on mouse brain.
Citation
Anti-Neurexin-3-alpha [IPI-mNRXN3a.67] in immunohistochemistry (IHC) (Mouse). Wong T, Grant S 2026. Addgene Report, https://doi.org/10.57733/addgene.jvibne
Caption: Synaptic puncta labelling in the adult mouse brain using fluorescent immunohistochemistry methods. Single synapse resolution images of Anti-Neurexin-3-alpha [IPI-mNRXN3a.67] (Addgene #237694) puncta in CA1sr and CA3sr subregions of the hippocampus (left), and a negative control omitting primary and secondary antibodies (right). Scale bars, 5 μm.
Image attribution: Seth Grant, University of Edinburgh

This report is made available under the Creative Commons Attribution 4.0 International License.

Antibodies Used
Anti-Neurexin-3-alpha [IPI-mNRXN3a.67]
Addgene #237694
Goat anti-rabbit IgG CY5
Jackson ImmunoResearch #111-175-144

Materials & Methods

Sample

Target Species
Mouse
Cell / Tissue Type
Adult mouse brain
Additional Information
18 μm sagittal tissue sections
Preparation
Frozen

Buffer

Name
PBS

Fixative

Fixative
Formaldehyde/Paraformaldehyde
Time
3–4 h post-fixation
Temperature
4 ˚C

Blocking

Agent
BSA
Concentration
5% BSA, 0.5% Triton-X in 1X TBS
Time
2 h
Temperature
Room Temperature

Primary Antibody

Name
Anti-Neurexin-3-alpha [IPI-mNRXN3a.67]
Source
Addgene
Catalog Number
237694
Host Species
Rabbit
Target Antigen
NRXN3
Concentration
4 µg/mL (1:250 dilution)
Time
Overnight
Temperature
4 ˚C
View in Addgene Catalog

Secondary Antibody

Name
Goat anti-rabbit IgG CY5
Source
Jackson ImmunoResearch
Catalog Number
111-175-144
Concentration
0.25 mg/mL (1:500 dilution)
Time
1 h
Temperature
Room Temperature

Additional Information

Additional Information

Animals were anaesthetised by intraperitoneal injection of 0.1 mL pentobarbital sodium BP 20% (Dolethal, Vetoquinol UK) and transcardially perfused with 10 mL phosphate buffered saline (PBS, Oxoid), followed by 10 mL 4% paraformaldehyde (Alfa Aesar 16%, diluted 1:4 in PBS). The brains were dissected and immediately post-fixed in same fixative for 3–4 h at 4 °C. Fixed samples were cryoprotected by incubating in 5 mL 30% sucrose (VWR International) in PBS for a minimum of 48 h at 4 °C or until they sank. Brains were frozen in Optimal Cutting Temperature (OCT, CellPath) using a beaker containing isopentane (VWR Chemicals) submerged into liquid nitrogen and stored at -80 °C.

Frozen mouse brain sections were defrosted to room temperature and rinsed with Tris buffer solution (1X TBS, pH 7.4, Sigma) for 5 min before addition of blocking solution containing 5% bovine serum albumin (BSA, Sigma) and 0.5% Triton X-100 (Sigma) in 1X TBS. Slides were incubated at room temperature for 2 h in 100μL blocking solution prior to overnight incubation at 4 °C in 100 μL primary antibody and diluent solution (3% BSA, 0.2% Triton X-100 in 1X TBS). Sections were then washed three times for 10 min each before secondary antibody incubation. The washing step was repeated, followed by mounting with a glass coverslip (VWR, 1.5 thickness, 18 mm diameter) using Mowiol mounting reagent (Sigma-Aldrich) with 1,4-diazabicyclo [2.2.2]octane (DABCO). Slides were left to curate overnight in a dry staining chamber before imaging.

Sagittal tissue sections (18 μm thickness) were cut using a Leica CM3050S cryostat at -20 °C. PBS was used as adhesive to collect tissue onto SuperFrost Plus slides (Thermo Scientific, J1800AMNZ). Slides were left to dry overnight at room temperature and stored at -20 °C until use.

Controls
Negative control: Omission of primary and secondary antibodies

Results

Result
Pass (The antibody worked under these conditions)
Describe Results
Observed puncta in CA1sr and CA3sr subregions of the hippocampus, consistent with known NRXN3 expression patterns.